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SRX24201119: Illumina reads of V. fischeri H905
1 ILLUMINA (Illumina HiSeq 2500) run: 12M spots, 2.4G bases, 1.5Gb downloads

Design: modified high-throughput Nextera library construction protocol
Submitted by: University of New Hampshire
Study: Vibrio fischeri H905 PacBio reads Apr24
show Abstracthide Abstract
Vibrio fischeri is a bioluminescent bacterium known for its mutualism with the Hawaiian bobtail squid, Euprymna scolopes. However, symbiotic capacity varies greatly even between closely related strains and does not correlate with phylogeny, making V. fischeri a natural model to study the complex evolutionary dynamics underlying host-microbe symbioses. Here we report the complete genome sequence of V. fischeri strain H905, which was isolated from the E. scolopes habitat. H905 is a planktonic isolate unable to competitively colonize E. scolopes despite close cladal relationship to multiple squid isolates, including model symbiont strain ES114.
Sample:
SAMN40903383 • SRS20972876 • All experiments • All runs
Library:
Name: H905 Illumina
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: SINGLE
Runs: 1 run, 12M spots, 2.4G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR2860261311,991,4862.4G1.5Gb2024-04-09

ID:
32512818

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